Overview

Instructor: Dylan Rodriguez, Ridham Patoliya, Emmanuel Preciado, Duy Pham, Chris Peter Francis

Time: January 25, 27, 28 @ 10AM / 12:30PM

Location: Blocker 220 and online using Zoom

Prerequisites: HPRC account, Zoom Account with Internet Connection, Laptop (In-Person Sessions)

Course Details

In-Person

All Primers will be offered through Zoom. Participants have the option to attend In-Person (registration is limited).
Participants attending In-Person will need to bring their own laptop.

Course Materials

Materials

The resources are available as downloadable PDF files.

• Data Management Practices: Primer Spring 2022
• Jupyter Notebook on HPRC Open on Demand (OOD): Primer Spring 2022
• SLURM Job Scheduling: Primer Spring 2022
• Introduction to the Grace Cluster: Primer Spring 2022
• Introduction to the Terra Cluster: Primer Spring 2022
• Introduction to Linux: Primer Spring 2022

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• Introduction to HPRC, Duo, VPN and Clusters: Primer Summer 2021
• Introduction to Linux and Cluster Login: Primer Summer 2021
• Using SLURM on the Terra Cluster: Primer Summer 2021

YouTube Playlist

Primer recordings are available on the HPRC YouTube channel

Note: The recordings need to be processed and hence will not be available immediately after the presentation.

Topics

Introduction to Linux
Tuesday, January 25 @ 10am

• Basic commands
• Process and filesystem concepts
• Shell scripts

Introduction to the Terra Cluster
Tuesday, January 25 @ 12:30pm

• Basic system information
• Compiling and running programs
• Creating and submitting SLURM batch jobs

Introduction to the Grace Cluster
Thursday, January 27 @ 10am

• Basic system information
• Compiling and running programs
• Creating and submitting SLURM batch jobs

SLURM Job Scheduling
Thursday, January 27 @ 12:30pm

• Building job files
• Job submission on Terra
• Queues, wait times and job management

Running Jupyter Notebook on HPRC Open on Demand (OOD)
Friday, January 28 @ 10am

• How to launch the Portal
• How to launch the Notebook in the Portal
• How to use a Jupyter Notebook

Data Management Practices
Friday, January 28 @ 12:30pm

• Transfering data to/from Grace/Terra
• Using Globus for Data Management on Grace/Terra
• Data lifecycle on Grace/Terra
• Data policies on Grace/Terra