HPRC Primers
Overview
Instructor: Dylan Rodriguez, Ridham Patoliya, Emmanuel Preciado, Duy Pham, Chris Peter Francis
Time: January 25, 27, 28 @ 10AM / 12:30PM
Location: Blocker 220 and online using Zoom
Prerequisites: HPRC account, Zoom Account with Internet Connection, Laptop (In-Person Sessions)
Course Details
In-Person
All Primers will be offered through Zoom. Participants have the option to attend In-Person (registration is limited).
Participants attending In-Person will need to bring their own laptop.
Course Materials
Materials
The resources are available as downloadable PDF files.
- Data Management Practices: Primer Spring 2022
- Jupyter Notebook on HPRC Open on Demand (OOD): Primer Spring 2022
- SLURM Job Scheduling: Primer Spring 2022
- Introduction to the Grace Cluster: Primer Spring 2022
- Introduction to the Terra Cluster: Primer Spring 2022
- Introduction to Linux: Primer Spring 2022
- Introduction to HPRC, Duo, VPN and Clusters: Primer Summer 2021
- Introduction to Linux and Cluster Login: Primer Summer 2021
- Using SLURM on the Terra Cluster: Primer Summer 2021
YouTube Playlist
Primer recordings are available on the HPRC YouTube channel
Note: The recordings need to be processed and hence will not be available immediately after the presentation.Topics
Introduction to Linux
Tuesday, January 25 @ 10am
- Basic commands
- Process and filesystem concepts
- Shell scripts
Introduction to the Terra Cluster
Tuesday, January 25 @ 12:30pm
- Basic system information
- Compiling and running programs
- Creating and submitting SLURM batch jobs
Introduction to the Grace Cluster
Thursday, January 27 @ 10am
- Basic system information
- Compiling and running programs
- Creating and submitting SLURM batch jobs
SLURM Job Scheduling
Thursday, January 27 @ 12:30pm
- Building job files
- Job submission on Terra
- Queues, wait times and job management
Running Jupyter Notebook on HPRC Open on Demand (OOD)
Friday, January 28 @ 10am
- How to launch the Portal
- How to launch the Notebook in the Portal
- How to use a Jupyter Notebook
Data Management Practices
Friday, January 28 @ 12:30pm
- Transfering data to/from Grace/Terra
- Using Globus for Data Management on Grace/Terra
- Data lifecycle on Grace/Terra
- Data policies on Grace/Terra