NGS Genotyping with Sequencing
Overview
Instructor(s): Shichen Wang
Time: Friday July 24, 2020 — 10:30AM-1:00PM CT
Location: Zoom session only
Prerequisite(s): Current Ada account
This short course is designed to familiarize students with the data analysis of RADSeq/GBS. RADSeq/GBS data could provide markers that are spread evenly across a genome which make it a great tool for genetic and genomic analysis in the model and non-model organisms. This short course will cover how to design the RADSeq/GBS experiments as well as the steps of how to analyze the sequencing data.
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Course Materials
Presentation slides
The presentation slides are available as downloadable PDF files.
Participation
During the training, attendees are expected to log in to an HPRC cluster using their own computer and complete the instructor-led examples and exercises.
Agenda
This course focuses, among others, on the following topics:
- RADSeq/GBS experimental design
- RADSeq/GBS sequence data analysis