NGS RADSeq/GBS

Overview

Instructor: Shichen Wang

Time: Tuesday, October 16, 10:00AM-12:30PM

Location: WCL 126

Prerequisites: Ada account

This short course is designed to familiarize students with the data analysis of RADSeq/GBS. RADSeq/GBS data could provide markers that are spread evenly across a genome which make it a great tool for genetic and genomic analysis in the model and non-model organisms. This short course will cover how to design the RADSeq/GBS experiments as well as the steps of how to analyze the sequencing data.

Course Materials

Presentation slides

The presentation slides are available as downloadable PDF files.

  • Introduction to RADSeq/GBS (Fall 2018): PDF
  • Introduction to RADSeq/GBS (Spring 2018): PDF

Agenda

This course focuses, among others, on the following topics:

  • RADSeq/GBS experimental design
  • RADSeq/GBS sequence data analysis

Note: During the class sessions many aspects of the material will be illustrated live via a login to Ada. Attendees are welcome to follow these parts with their own laptops. They will need to configure their laptops to use the TAMULink wireless network. Relevant details on this can be found at: http://tamulink.tamu.edu/

You are encouraged to contact the HPRC helpdesk with any questions regarding Ada.