NGS Metagenomics

Overview

Instructor(s): Dr. Wesley Brashear

Time: Friday, February 13, 2026 1:30PM-4:00PM CT

Location: Blocker 220

Prerequisite(s): Active HPRC account

This short course introduces concepts of metagenomics analysis based on data generated by Next Generation Sequencing (NGS) technology.

Course Materials

  • NGS Metagenomics (Fall 2025): PDF

  • NGS Metagenomics (Fall 2022): PDF

Participation

During the training, attendees are expected to use their own computer and complete the instructor-led examples and exercises.

Learning Objectives and Agenda

In this course, participants will:

  • Learn the different sequencing strategies employed in metagenomics
  • Learn how to complete a full single-gene marker metagenomics workflow using the QIIME2 software suite

This course focuses, among others, on the following topics:

  • Sequencing strategies
  • QIIME2
  • Data preprocessing
  • OTU clustering
  • Alpha diversity analysis
  • Beta diversity analysis