NGS Metagenomics

Overview

Instructor: Wesley Brashear

Time: Friday, December 2, 10:0AM-12:30PM

Location: Blocker 220

Prerequisites: Current HPRC account

This short course introduces concepts of metagenomics analysis based on data generated by Next Generation Sequencing (NGS) technology.

Course Materials

Presentation slides

The presentation slides are available as downloadable PDF files.

  • NGS Metagenomics (Fall 2022): PDF

Previous Semester Materials

  • NGS Metagenomics (Fall 2019): PDF
  • NGS Metagenomics commands (Fall 2019): TXT
  • NGS Metagenomics job script (Fall 2019): SH
  • NGS Metagenomics (Spring 2019): PDF
  • NGS Metagenomics commands (Spring 2019): PDF
  • NGS Metagenomics (Fall 2018): PDF
  • NGS Metagenomics commands (Fall 2018): txt
  • NGS Metagenomics (Spring 2018): PDF
  • NGS Metagenomics commands (Spring 2018): txt
  • NGS Metagenomics (Fall 2017): PDF

Agenda

This course focuses, among others, on the following topics:

  • Metagenomics data analysis

Note: During the class sessions many aspects of the material will be illustrated live via a login to Ada. Attendees are welcome to follow these parts with their own laptops. They will need to configure their laptops to use the TAMULink wireless network. Relevant details on this can be found at: http://tamulink.tamu.edu/

You are encouraged to contact the HPRC helpdesk with any questions regarding Ada.