Introduction to CryoSPARC for Cryo-EM Data Processing on HPRC in Collaboration with BCBP Cryo-EM Research Center


Instructor: Michael Dickens, Gaya Yadav

Time: Friday, Apr 14, 2023 — 1:30PM-4:00PM CT

Location: Blocker 220

Prerequisites: Current HPRC account, CryoSPARC Academic License ID

This course will cover aspects of using CryoSPARC on HPRC resources including accessing CryoSPARC on the Grace cluster followed by a demonstration with example image files.

Course Materials

  • Introduction to CryoSPARC for cryo-EM Data Processing (Spring 2023): PDF
  • Introduction to CryoSPARC for cryo-EM Data Processing BCRC (Spring 2023): PDF


This course focuses on the following topics:

  • CryoSPARC on the HPRC Portal
  • Resources and Limitations
  • Group data directories
  • CryoSPARC Demo

You must first get an individual academic license id from in order to launch CryoSPARC.

We gratefully acknowledge support from NSF award #1925764, CC* Team: SWEETER -- SouthWest Expertise in Expanding, Training, Education and Research, Texas A&M's High Performance Research Computing, and Texas A&M's Laboratory for Molecular Simulation.