Hprc banner tamu.png

SW:pbalign

From TAMU HPRC
Jump to: navigation, search

pbalign

GCATemplates available: ada

pbalign homepage

pbalign maps PacBio reads to reference sequences.

module load SMRT-Link/10.1.0.119588-cli-tools-only

Also be sure to specify the number of OMP threads. If you are using 20 cores "#SBATCH --cpus-per-task=28" then use:

export OMP_NUM_THREADS=20