Hprc banner tamu.png

Terra:Batch Job Files

From TAMU HPRC
Revision as of 14:21, 25 October 2016 by Whomps (talk | contribs)
Jump to: navigation, search

Job Files

While not the only method of submitted a job, job files fulfill the needs of most users.

The general idea behind job files follows:

  • Make resource requests
  • Add your commands and/or scripting
  • Submit the job to the batch system

Several of the most important options are described below. These options are typically all that is needed to run a job on Terra.

Specification Option Example Example-Purpose
Reset Env I --export=NONE Do not propagate environment to job
Reset Env II --get-user-env=L Replicate the login environment
Node Count -N [min[-max]] -N 4 Spread all cores across 4 nodes
Total Task/Core Count -n [#] -n 16 Request 16 tasks/cores total
Compute Nodes: 256 compute nodes, each with 64GB RAM
48 GPU nodes, each with a single Tesla K80 GPU and 128GB of RAM
Interconnect: Intel OmniPath100 Series switches.
Peak Performance: ~X TFLOPs (TBD)
Global Disk: 1.5PB (raw) via IBM's GSS26 appliance for general use
1.5PB (raw) via IBM's GSS256 purchased by a dedicated for GeoPhysics
File System: General Parallel File System (GPFS)
Batch Facility: Slurm by SchedMD
Location: Teague Data Center
Production Date: Fall 2016 (tentative)

It should be noted that Slurm divides processing resources as such: Nodes -> Cores/CPUs -> Tasks

A user may change the number of tasks per core. For the purposes of this guide, all cores will be associated with exactly a single task.

Several examples of Slurm job files for Terra are listed below. For translating Ada/LSF job files, the Batch Job Translation Guide provides some reference.

Documentation for advanced options can be found under Advanced Documentation.