Difference between revisions of "Terra:Batch Job Files"
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A user may change the number of tasks per core. For the purposes of this guide, all cores will be associated with exactly a single task. | A user may change the number of tasks per core. For the purposes of this guide, all cores will be associated with exactly a single task. | ||
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Several examples of Slurm job files for Terra are listed below. For translating Ada/LSF job files, the [[HPRC:Batch_Translation | Batch Job Translation Guide]] provides some reference. | Several examples of Slurm job files for Terra are listed below. For translating Ada/LSF job files, the [[HPRC:Batch_Translation | Batch Job Translation Guide]] provides some reference. | ||
Documentation for advanced options can be found under [[Terra:Batch:Advanced Documentation | Advanced Documentation]]. | Documentation for advanced options can be found under [[Terra:Batch:Advanced Documentation | Advanced Documentation]]. | ||
Revision as of 15:05, 25 October 2016
Job Files
While not the only method of submitted a job, job files fulfill the needs of most users.
The general idea behind job files follows:
- Make resource requests
- Add your commands and/or scripting
- Submit the job to the batch system
Several of the most important options are described below. These options are typically all that is needed to run a job on Terra.
| Specification | Option | Example | Example-Purpose |
|---|---|---|---|
| Reset Env I | --export=NONE | Do not propagate environment to job | |
| Reset Env II | --get-user-env=L | Replicate the login environment | |
| Wall Clock Limit | -t [hh:mm:ss] | -t 01:15:00 | Set wall clock limit to 1 hour 15 min |
| Job Name | -J [SomeText] | -J mpiJob | Set the job name to "mpiJob" |
| Node Count | -N [min[-max]] | -N 4 | Spread all tasks/cores across 4 nodes |
| Total Task/Core Count | -n [#] | -n 16 | Request 16 tasks/cores total |
| Memory Per Node | --mem=[K|M|G|T] | --mem=32768M | Request 32768 MB (32 GB) per node |
| Combined stdout/stderr | -j oe [OutputName].%j | -j oe mpiOut.%j | Collect stdout/err in mpiOut.[JobID] |
It should be noted that Slurm divides processing resources as such: Nodes -> Cores/CPUs -> Tasks
A user may change the number of tasks per core. For the purposes of this guide, all cores will be associated with exactly a single task.
Several examples of Slurm job files for Terra are listed below. For translating Ada/LSF job files, the Batch Job Translation Guide provides some reference.
Documentation for advanced options can be found under Advanced Documentation.
