envsavail

The envsavail command is available on all clusters and will display the currently available shared conda environments for all Anaconda modules.

Usage

Synopsis:
  Will show the currently available shared conda environments for all Anaconda modules.

  Example of loading a conda environment:

      module purge
      module load Anaconda3/2022.05
      source activate /sw/hprc/sw/Anaconda3/2022.05/envs/qiime2-2024.5

  Example of exiting the conda environment:

      conda deactivate

Options:
    -h|--help       show usage

Example Output

envsavail

            Anaconda3/2024.02-1
/sw/hprc/sw/Anaconda3/2024.02-1/envs/qiime2-2024.5-amplicon
/sw/hprc/sw/Anaconda3/2024.02-1/envs/SQANTI3-5.2.1

            Anaconda3/2023.07-2
/sw/hprc/sw/Anaconda3/2023.07-2/envs/qiime2-2024.2-amplicon
/sw/hprc/sw/Anaconda3/2023.07-2/envs/qiime2-2024.2-shotgun

            Anaconda3/2022.05
/sw/hprc/sw/Anaconda3/2022.05/envs/grizli-1.5.0
/sw/hprc/sw/Anaconda3/2022.05/envs/qiime2-2020.8
/sw/hprc/sw/Anaconda3/2022.05/envs/qiime2-2022.8
/sw/hprc/sw/Anaconda3/2022.05/envs/qiime2-2023.5
/sw/hprc/sw/Anaconda3/2022.05/envs/qiime2-2024.5
/sw/hprc/sw/Anaconda3/2022.05/envs/virsorter-2.2.3